Index _ | A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | V | W _ __getitem__() (idtrackerai.base.tracker.contrastive.PairsOfFragments method) __getstate__() (idtrackerai.Blob method) (idtrackerai.Fragment method) __init__() (idtrackerai.base.tracker.contrastive.BatchSampler method) (idtrackerai.base.tracker.contrastive.ContrastiveDataLoader method) (idtrackerai.base.tracker.contrastive.ContrastiveLearning method) (idtrackerai.base.tracker.contrastive.PairsOfFragments method) (idtrackerai.Blob method) (idtrackerai.Fragment method) (idtrackerai.GlobalFragment method) (idtrackerai.ListOfBlobs method) (idtrackerai.ListOfFragments method) (idtrackerai.ListOfGlobalFragments method) __iter__() (idtrackerai.base.tracker.contrastive.BatchSampler method) __len__() (idtrackerai.base.tracker.contrastive.PairsOfFragments method) __str__() (idtrackerai.Fragment method) (idtrackerai.Session method) __subclasshook__() (idtrackerai.base.tracker.contrastive.ContrastiveDataLoader class method) A acceptable_for_training (idtrackerai.Fragment attribute) acceptable_for_training() (idtrackerai.GlobalFragment method) accumulable (idtrackerai.Fragment attribute) accumulated_globally (idtrackerai.Fragment attribute) accumulated_partially (idtrackerai.Fragment attribute) accumulation_step (idtrackerai.Fragment attribute) (idtrackerai.GlobalFragment attribute) add_blob() (idtrackerai.ListOfBlobs method) add_centroid() (idtrackerai.Blob method) all_blobs (idtrackerai.ListOfBlobs property) all_final_identities (idtrackerai.Blob property) all_final_ids_and_centroids (idtrackerai.Blob property) ambiguous_identities (idtrackerai.Fragment attribute) area (idtrackerai.Blob property) assign_identity() (idtrackerai.Fragment method) assigned_centroids (idtrackerai.Blob property) assigned_identities (idtrackerai.Blob property) (idtrackerai.Fragment property) B background_from_segmentation_gui (idtrackerai.Session attribute) batch_size (idtrackerai.base.tracker.contrastive.BatchSampler attribute) (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) BatchSampler (class in idtrackerai.base.tracker.contrastive) bbox_contains_point() (idtrackerai.Blob method) bbox_corners (idtrackerai.Blob property) bbox_in_frame_coordinates (idtrackerai.Blob property) Blob (class in idtrackerai) blobs_in_video (idtrackerai.ListOfBlobs attribute) blobs_path (idtrackerai.Session property) bounding_box_images_in_ram (idtrackerai.Session attribute) build_exclusive_rois() (idtrackerai.ListOfFragments method) C certainty (idtrackerai.Fragment attribute) certainty_P2 (idtrackerai.Fragment property) coexist_with() (idtrackerai.Fragment method) coexisting_individual_fragments (idtrackerai.Fragment attribute) collate_fun() (in module idtrackerai.base.tracker.contrastive) compress_data() (idtrackerai.Session method) compute_border_velocity() (idtrackerai.Fragment method) compute_identification_statistics() (idtrackerai.Fragment method) compute_median_softmax() (idtrackerai.Fragment static method) compute_overlapping_between_subsequent_frames() (idtrackerai.ListOfBlobs method) compute_P2_vector() (idtrackerai.Fragment method) compute_P2_vectors() (idtrackerai.ListOfFragments method) connect_coexisting_fragments() (idtrackerai.ListOfFragments method) contour (idtrackerai.Blob attribute) ContrastiveDataLoader (class in idtrackerai.base.tracker.contrastive) ContrastiveLearning (class in idtrackerai.base.tracker.contrastive) convexHull (idtrackerai.Blob property) criterion() (idtrackerai.base.tracker.contrastive.ContrastiveLearning static method) D delete_data() (idtrackerai.Session method) distance_from_countour_to() (idtrackerai.Blob method) distance_travelled (idtrackerai.Fragment property) E embedding_dimensions (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) end_position (idtrackerai.Fragment attribute) episodes (idtrackerai.Fragment attribute) (idtrackerai.Session attribute) estimated_body_length (idtrackerai.Blob property) exclusive_roi (idtrackerai.Blob attribute) (idtrackerai.Fragment attribute) exclusive_rois (idtrackerai.Session attribute) extension (idtrackerai.Blob property) F final_centroids (idtrackerai.Blob property) forced_crossing (idtrackerai.Blob attribute) (idtrackerai.Fragment attribute) Fragment (class in idtrackerai) fragment_connectivity (idtrackerai.Session attribute) fragment_identifier (idtrackerai.Blob attribute) fragments_not_accumulated (idtrackerai.ListOfFragments property) fragments_path (idtrackerai.Session property) frame_by_frame_velocity (idtrackerai.Fragment attribute) frame_number (idtrackerai.Blob attribute) frames_per_second (idtrackerai.Session attribute) from_fragmented_blobs() (idtrackerai.ListOfFragments class method) from_fragments() (idtrackerai.ListOfGlobalFragments class method) G generate_general_video() (in module idtrackerai.extra_tools.video_generator) generate_individual_video() (in module idtrackerai.extra_tools.video_generator) get_bbox_mask() (idtrackerai.Blob method) get_connectivity() (idtrackerai.ListOfFragments method) get_fragments_to_identify() (idtrackerai.ListOfFragments method) get_image_for_identification() (idtrackerai.Blob method) get_images_and_labels() (idtrackerai.GlobalFragment method) get_info_from_video_paths() (idtrackerai.Session static method) get_neighbour_fragment() (idtrackerai.Fragment method) get_next_fragment_to_identify() (idtrackerai.ListOfFragments method) get_number_of_unidentified_individual_fragments() (idtrackerai.ListOfFragments method) get_ordered_list_of_fragments() (idtrackerai.ListOfFragments method) get_processing_episodes() (idtrackerai.Session static method) get_stats() (idtrackerai.ListOfFragments method) gfrag_loader (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) global_fragments (idtrackerai.ListOfGlobalFragments attribute) global_fragments_path (idtrackerai.Session property) GlobalFragment (class in idtrackerai) groundtruth_identity (idtrackerai.Fragment attribute) H has_a_next_crossing (idtrackerai.Blob property) has_a_previous_crossing (idtrackerai.Blob property) has_been_modified (idtrackerai.Blob property) has_enough_accumulated_coexisting_fragments (idtrackerai.Fragment property) has_multiple_next (idtrackerai.Blob property) has_multiple_previous (idtrackerai.Blob property) height (idtrackerai.Session attribute) I id_image_index (idtrackerai.Blob attribute) id_image_size (idtrackerai.Session attribute) id_to_exclusive_roi (idtrackerai.ListOfFragments attribute) identities_colors (idtrackerai.Session attribute) identities_corrected_closing_gaps (idtrackerai.Blob attribute) (idtrackerai.Fragment attribute) identities_groups (idtrackerai.Session attribute) identities_labels (idtrackerai.Session attribute) identity (idtrackerai.Blob attribute) (idtrackerai.Fragment attribute) identity_certainty (idtrackerai.Blob attribute) identity_corrected_solving_jumps (idtrackerai.Blob attribute) (idtrackerai.Fragment attribute) identity_is_fixed (idtrackerai.Fragment attribute) identity_transfer_succeeded (idtrackerai.Session attribute) idmatcherai() (in module idtrackerai.extra_tools.idmatcherai) idtrackerai.base.tracker.contrastive module idtrackerai.extra_tools.cluster_inspection module idtrackerai.extra_tools.idmatcherai module idtrackerai.extra_tools.validator module idtrackerai.extra_tools.video_generator module idtrackerai_validate() (in module idtrackerai.extra_tools.validator) images (idtrackerai.Fragment attribute) is_a_crossing (idtrackerai.Blob property) is_a_sure_crossing() (idtrackerai.Blob method) is_a_sure_individual() (idtrackerai.Blob method) is_an_individual (idtrackerai.Blob attribute) is_certain (idtrackerai.Fragment property) is_in_a_global_fragment (idtrackerai.Fragment attribute) is_inconsistent_with_coexistent_fragments() (idtrackerai.Fragment method) is_partially_unique (idtrackerai.GlobalFragment property) is_unique() (idtrackerai.GlobalFragment method) L last_validated (idtrackerai.Session attribute) learning_rate (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) length_calibrations (idtrackerai.Session attribute) length_unit (idtrackerai.Session property) ListOfBlobs (class in idtrackerai) ListOfFragments (class in idtrackerai) ListOfGlobalFragments (class in idtrackerai) load() (idtrackerai.ListOfBlobs class method) (idtrackerai.ListOfFragments class method) (idtrackerai.ListOfGlobalFragments class method) (idtrackerai.Session class method) load_from_v4() (idtrackerai.ListOfBlobs method) load_images_in_memory() (idtrackerai.ListOfFragments method) loaded_images (idtrackerai.Fragment attribute) loss_scores (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) M manage_accumulable_non_accumulable_fragments() (idtrackerai.ListOfFragments method) max_number_of_blobs_in_one_frame (idtrackerai.ListOfBlobs property) median_body_length (idtrackerai.Session attribute) model (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) model_test() (in module socialnet) model_train() (in module socialnet) module idtrackerai.base.tracker.contrastive idtrackerai.extra_tools.cluster_inspection idtrackerai.extra_tools.idmatcherai idtrackerai.extra_tools.validator idtrackerai.extra_tools.video_generator N n_animals (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) n_batches (idtrackerai.base.tracker.contrastive.BatchSampler attribute) n_images (idtrackerai.Fragment property) n_images_in_global_fragments (idtrackerai.ListOfFragments property) n_negative_pairs (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) negative_pairs_sizes (idtrackerai.base.tracker.contrastive.BatchSampler attribute) negative_probabilities (idtrackerai.base.tracker.contrastive.BatchSampler attribute) new_timer() (idtrackerai.Session method) next (idtrackerai.Blob attribute) no_global_fragment() (idtrackerai.ListOfGlobalFragments method) non_accumulable_global_fragments (idtrackerai.ListOfGlobalFragments attribute) non_consistent (idtrackerai.Fragment attribute) now_points_to() (idtrackerai.Blob method) number_of_accumulable_individual_blobs (idtrackerai.ListOfFragments property) number_of_accumulable_individual_fragments (idtrackerai.ListOfFragments property) number_of_blobs (idtrackerai.ListOfBlobs property) (idtrackerai.ListOfFragments property) number_of_crossing_blobs (idtrackerai.ListOfFragments property) number_of_episodes (idtrackerai.Session property) number_of_error_frames (idtrackerai.Session attribute) number_of_frames (idtrackerai.ListOfBlobs property) number_of_globally_accumulated_individual_blobs (idtrackerai.ListOfFragments property) number_of_globally_accumulated_individual_fragments (idtrackerai.ListOfFragments property) number_of_individual_blobs (idtrackerai.ListOfFragments property) number_of_individual_blobs_not_in_a_global_fragment (idtrackerai.ListOfFragments property) number_of_individual_fragments_not_in_a_glob_fragment (idtrackerai.ListOfFragments property) number_of_not_accumulable_individual_blobs (idtrackerai.ListOfFragments property) number_of_not_accumulable_individual_fragments (idtrackerai.ListOfFragments property) number_of_partially_accumulated_individual_blobs (idtrackerai.ListOfFragments property) number_of_partially_accumulated_individual_fragments (idtrackerai.ListOfFragments property) O optimizer (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) overlaps_with() (idtrackerai.Blob method) P P1_vector (idtrackerai.Fragment attribute) P2_vector (idtrackerai.Fragment attribute) pairs (idtrackerai.base.tracker.contrastive.PairsOfFragments attribute) PairsOfFragments (class in idtrackerai.base.tracker.contrastive) plot_aggregation_subnetwork() (in module socialnet.plot) plot_interaction_scores() (in module socialnet.plot) plot_interaction_subnetwork() (in module socialnet.plot) plot_product() (in module socialnet.plot) positive_pairs_sizes (idtrackerai.base.tracker.contrastive.BatchSampler attribute) positive_probabilities (idtrackerai.base.tracker.contrastive.BatchSampler attribute) prepare_tracking() (idtrackerai.Session method) previous (idtrackerai.Blob attribute) propagate_identity() (idtrackerai.Blob method) properties (idtrackerai.Blob property) (idtrackerai.Fragment property) R ratio_of_images_used_for_pretraining (idtrackerai.ListOfFragments property) ratio_of_images_used_for_training (idtrackerai.ListOfFragments property) remove_centroid() (idtrackerai.Blob method) reset() (idtrackerai.Fragment method) (idtrackerai.ListOfFragments method) reset_user_generated_corrections() (idtrackerai.ListOfBlobs method) S save() (idtrackerai.ListOfBlobs method) (idtrackerai.ListOfFragments method) (idtrackerai.ListOfGlobalFragments method) (idtrackerai.Session method) saving_folder (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) scatter_plot() (in module idtrackerai.extra_tools.cluster_inspection) seems_like_individual (idtrackerai.Blob attribute) Session (class in idtrackerai) set_certainty_of_individual_fragment() (idtrackerai.Fragment method) set_id_image_size() (idtrackerai.Session method) set_identification_statistics() (idtrackerai.Fragment method) set_images_for_identification() (idtrackerai.ListOfBlobs method) set_model() (idtrackerai.base.tracker.contrastive.ContrastiveLearning method) set_P1_from_frequencies() (idtrackerai.Fragment method) set_parameters() (idtrackerai.Session method) set_partially_or_globally_accumulated() (idtrackerai.Fragment method) silhouette_score (idtrackerai.Session attribute) silhouette_scores() (in module idtrackerai.base.tracker.contrastive) single_global_fragment() (idtrackerai.ListOfGlobalFragments method) sort_by_distance_to_the_frame() (idtrackerai.ListOfGlobalFragments method) square_distance_to() (idtrackerai.Blob method) start_position (idtrackerai.Fragment attribute) T temporary_id (idtrackerai.Fragment attribute) total_number_of_images (idtrackerai.GlobalFragment property) train() (idtrackerai.base.tracker.contrastive.ContrastiveLearning method) train_loader (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) train_step() (idtrackerai.base.tracker.contrastive.ContrastiveLearning method) trajectories_formats (idtrackerai.Session attribute) U update_blobs() (idtrackerai.ListOfFragments method) update_centroid() (idtrackerai.Blob method) update_id_image_dataset_with_crossings() (idtrackerai.ListOfBlobs method) update_id_images_dataset() (idtrackerai.ListOfFragments method) update_identity() (idtrackerai.Blob method) update_paths() (idtrackerai.Session method) update_probabilities() (idtrackerai.base.tracker.contrastive.BatchSampler method) used_for_pretraining (idtrackerai.Fragment property) used_for_training (idtrackerai.Fragment attribute) (idtrackerai.GlobalFragment property) used_for_training_crossings (idtrackerai.Blob attribute) user_generated_centroids (idtrackerai.Blob attribute) user_generated_identities (idtrackerai.Blob attribute) V val_loader (idtrackerai.base.tracker.contrastive.ContrastiveLearning attribute) version (idtrackerai.Session attribute) video_paths (idtrackerai.Session attribute) W was_a_crossing (idtrackerai.Blob attribute) width (idtrackerai.Session attribute)
